Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CISHQ9NSE2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CISHQ9NSE2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CISHQ9NSE2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CISHQ9NSE2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CISHQ9NSE2 AC007952.5-201ENST00000572818 1486 ntBASIC15.33■□□□□ 0.04
CISHQ9NSE2 AC138028.6-201ENST00000616106 1482 ntBASIC15.33■□□□□ 0.04
CISHQ9NSE2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CISHQ9NSE2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CISHQ9NSE2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CISHQ9NSE2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.33■□□□□ 0.04
CISHQ9NSE2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.32■□□□□ 0.04
CISHQ9NSE2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 FNTAP2-201ENST00000430308 634 ntBASIC15.32■□□□□ 0.04
CISHQ9NSE2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SCARNA20.5-201ENST00000516991 142 ntBASIC15.32■□□□□ 0.04
CISHQ9NSE2 MIR3615-201ENST00000581999 87 ntBASIC15.32■□□□□ 0.04
CISHQ9NSE2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CISHQ9NSE2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CISHQ9NSE2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 AKR7A2P1-201ENST00000460134 915 ntBASIC15.31■□□□□ 0.04
CISHQ9NSE2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 MIR3188-201ENST00000583494 85 ntBASIC15.31■□□□□ 0.04
CISHQ9NSE2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 AC244093.1-201ENST00000610837 814 ntBASIC15.31■□□□□ 0.04
CISHQ9NSE2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.31■□□□□ 0.04
CISHQ9NSE2 AC100757.4-201ENST00000626934 759 ntBASIC15.31■□□□□ 0.04
CISHQ9NSE2 NAP1L6-202ENST00000641404 1222 ntBASIC15.31■□□□□ 0.04
CISHQ9NSE2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CISHQ9NSE2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms