Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DUX4L47-201ENST00000566374 394 ntBASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 AC138696.2-201ENST00000607376 223 ntBASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 Z82244.2-201ENST00000632196 448 ntBASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 PPT1-215ENST00000641471 2368 ntBASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CNTNAP3Q9BZ76 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 FKBP4P8-201ENST00000610931 1369 ntBASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AL080243.1-201ENST00000423293 1060 ntBASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AL773545.2-201ENST00000442149 472 ntBASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AC098934.1-203ENST00000442868 1262 ntBASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 CDK4P1-201ENST00000454213 828 ntBASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 GGNBP1-204ENST00000613113 887 ntBASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AC103798.2-201ENST00000624292 632 ntBASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNTNAP3Q9BZ76 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 AC023157.3-201ENST00000619086 2088 ntBASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNTNAP3Q9BZ76 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms