Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AL365181.3-201ENST00000605886 3222 ntBASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AP000347.1-202ENST00000435868 847 ntBASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 ENPP7P5-201ENST00000541031 1031 ntBASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AC133539.2-201ENST00000604757 467 ntBASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AC093726.1-201ENST00000608064 963 ntBASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 CICP1-201ENST00000416803 2410 ntBASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 AL928654.5-201ENST00000624831 2501 ntBASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC28BQ9BUN5 VENTXP1-201ENST00000569334 2716 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 DUX4L27-201ENST00000554796 1261 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AP001063.1-201ENST00000568332 529 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AC093028.1-201ENST00000622998 982 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AGAP12P-201ENST00000585227 2359 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AC131212.3-201ENST00000624087 4219 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 SLC7A15P-201ENST00000424028 1363 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 MIR497HG-202ENST00000572453 3838 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AP000593.2-201ENST00000542775 1433 ntBASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC28BQ9BUN5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms