Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL357563.1-201ENST00000404728 395 ntBASIC15.34■□□□□ 0.05
RNF135Q8IUD6 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AL807761.2-201ENST00000422849 729 ntBASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 RN7SL121P-201ENST00000584223 273 ntBASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AC084781.1-201ENST00000613737 656 ntBASIC15.34■□□□□ 0.05
RNF135Q8IUD6 LINC00552-201ENST00000625151 2579 ntBASIC15.34■□□□□ 0.05
RNF135Q8IUD6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 AC023908.3-201ENST00000564211 3047 ntBASIC15.33■□□□□ 0.05
RNF135Q8IUD6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
RNF135Q8IUD6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 IL9RP3-201ENST00000442856 1674 ntBASIC15.33■□□□□ 0.04
RNF135Q8IUD6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 DUTP3-201ENST00000450025 415 ntBASIC15.33■□□□□ 0.04
RNF135Q8IUD6 RN7SL81P-201ENST00000493781 261 ntBASIC15.33■□□□□ 0.04
RNF135Q8IUD6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MIR6720-201ENST00000611664 98 ntBASIC15.33■□□□□ 0.04
RNF135Q8IUD6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AC138466.5-201ENST00000624002 808 ntBASIC15.33■□□□□ 0.04
RNF135Q8IUD6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF135Q8IUD6 AC011840.2-201ENST00000563063 1520 ntBASIC15.33■□□□□ 0.04
RNF135Q8IUD6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AC023090.2-201ENST00000625182 2110 ntBASIC15.32■□□□□ 0.04
RNF135Q8IUD6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms