Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 FTLP1-201ENST00000449155 526 ntBASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PRKXP1-201ENST00000561423 1122 ntBASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 AC090386.2-201ENST00000623010 1039 ntBASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 RNA5SP359-201ENST00000364838 113 ntBASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AC026316.1-201ENST00000398900 414 ntBASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 TMEM198B-204ENST00000484016 896 ntBASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 RN7SL67P-201ENST00000492147 296 ntBASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AL109837.1-201ENST00000603272 613 ntBASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AP002353.1-201ENST00000528257 1599 ntBASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms