Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 RPL13AP3-202ENST00000494676 1473 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 MTHFR-210ENST00000641407 2387 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A21P-201ENST00000510875 1396 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A15P-201ENST00000514465 1395 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A6P-201ENST00000515148 1394 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A16P-201ENST00000526662 1395 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A9P-201ENST00000527940 1395 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A5P-201ENST00000528738 1395 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A14P-201ENST00000530386 1395 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FAM90A13P-201ENST00000534703 1395 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 SLC25A15P3-201ENST00000505530 290 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AL512310.5-201ENST00000551999 515 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AL132994.1-201ENST00000554098 400 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AL118516.1-201ENST00000564152 670 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AL009176.1-201ENST00000607876 650 ntBASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 KRT8P43-201ENST00000406052 1458 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 AC011498.7-201ENST00000624986 2027 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 SHMT1P1-201ENST00000419974 1312 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 FAM86B3P-203ENST00000523992 854 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 TREHP1-201ENST00000531328 465 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 AC013553.1-201ENST00000560906 267 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 TRMT112P3-201ENST00000580149 358 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 AC010976.2-201ENST00000609697 852 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 AL359091.4-201ENST00000610052 409 ntBASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM71Q2Q1W2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms