Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL16A1Q07092 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC18.53■□□□□ 0.56
COL16A1Q07092 RN7SL460P-201ENST00000582806 258 ntBASIC18.53■□□□□ 0.56
COL16A1Q07092 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC18.53■□□□□ 0.56
COL16A1Q07092 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 AC136475.9-201ENST00000605240 497 ntBASIC18.53■□□□□ 0.56
COL16A1Q07092 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL16A1Q07092 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.53■□□□□ 0.56
COL16A1Q07092 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.53■□□□□ 0.56
COL16A1Q07092 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.52■□□□□ 0.56
COL16A1Q07092 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC18.52■□□□□ 0.56
COL16A1Q07092 AL049792.1-201ENST00000424708 1262 ntBASIC18.52■□□□□ 0.56
COL16A1Q07092 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC18.52■□□□□ 0.56
COL16A1Q07092 RPL35P1-201ENST00000450819 370 ntBASIC18.52■□□□□ 0.56
COL16A1Q07092 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC18.52■□□□□ 0.56
COL16A1Q07092 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC18.52■□□□□ 0.56
COL16A1Q07092 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL16A1Q07092 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC18.52■□□□□ 0.56
COL16A1Q07092 AC006273.1-201ENST00000606966 861 ntBASIC18.52■□□□□ 0.56
COL16A1Q07092 AL133551.1-201ENST00000610279 1222 ntBASIC18.52■□□□□ 0.56
COL16A1Q07092 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.52■□□□□ 0.56
COL16A1Q07092 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL16A1Q07092 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL16A1Q07092 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC18.52■□□□□ 0.56
COL16A1Q07092 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.52■□□□□ 0.56
COL16A1Q07092 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL16A1Q07092 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
COL16A1Q07092 AC089987.1-201ENST00000551654 2209 ntBASIC18.52■□□□□ 0.56
COL16A1Q07092 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
COL16A1Q07092 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC18.52■□□□□ 0.55
COL16A1Q07092 CACYBPP3-201ENST00000406011 625 ntBASIC18.52■□□□□ 0.55
COL16A1Q07092 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC18.52■□□□□ 0.55
COL16A1Q07092 AC007622.1-201ENST00000488371 535 ntBASIC18.52■□□□□ 0.55
COL16A1Q07092 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC18.52■□□□□ 0.55
COL16A1Q07092 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC18.52■□□□□ 0.55
COL16A1Q07092 AC104759.1-201ENST00000559109 939 ntBASIC18.52■□□□□ 0.55
COL16A1Q07092 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL16A1Q07092 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC18.52■□□□□ 0.55
COL16A1Q07092 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC18.52■□□□□ 0.55
COL16A1Q07092 AC099795.2-201ENST00000639582 440 ntBASIC18.52■□□□□ 0.55
COL16A1Q07092 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC18.52■□□□□ 0.55
COL16A1Q07092 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COL16A1Q07092 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL16A1Q07092 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.52■□□□□ 0.55
COL16A1Q07092 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
COL16A1Q07092 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
COL16A1Q07092 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COL16A1Q07092 AL513477.1-201ENST00000602865 2407 ntBASIC18.51■□□□□ 0.55
COL16A1Q07092 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL16A1Q07092 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL16A1Q07092 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL16A1Q07092 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.51■□□□□ 0.55
COL16A1Q07092 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL16A1Q07092 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
COL16A1Q07092 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.51■□□□□ 0.55
COL16A1Q07092 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL16A1Q07092 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.51■□□□□ 0.55
COL16A1Q07092 AC011498.7-201ENST00000624986 2027 ntBASIC18.51■□□□□ 0.55
COL16A1Q07092 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.51■□□□□ 0.55
COL16A1Q07092 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC18.51■□□□□ 0.55
COL16A1Q07092 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL16A1Q07092 RNA5SP407-201ENST00000410275 110 ntBASIC18.51■□□□□ 0.55
COL16A1Q07092 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC18.51■□□□□ 0.55
COL16A1Q07092 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.51■□□□□ 0.55
COL16A1Q07092 RN7SL452P-201ENST00000482923 291 ntBASIC18.51■□□□□ 0.55
COL16A1Q07092 MIR4526-201ENST00000583168 87 ntBASIC18.51■□□□□ 0.55
COL16A1Q07092 AL121992.3-201ENST00000606186 346 ntBASIC18.51■□□□□ 0.55
COL16A1Q07092 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms