Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.86■□□□□ 0.29
IRX3P78415 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.86■□□□□ 0.29
IRX3P78415 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
IRX3P78415 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
IRX3P78415 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
IRX3P78415 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 Z82170.1-201ENST00000625081 3192 ntBASIC16.85■□□□□ 0.29
IRX3P78415 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
IRX3P78415 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
IRX3P78415 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
IRX3P78415 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 AC018463.1-201ENST00000456674 917 ntBASIC16.85■□□□□ 0.29
IRX3P78415 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.85■□□□□ 0.29
IRX3P78415 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 AL022334.2-201ENST00000610000 484 ntBASIC16.85■□□□□ 0.29
IRX3P78415 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.85■□□□□ 0.29
IRX3P78415 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
IRX3P78415 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.85■□□□□ 0.29
IRX3P78415 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
IRX3P78415 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.85■□□□□ 0.29
IRX3P78415 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IRX3P78415 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 MARK2P16-201ENST00000605714 1723 ntBASIC16.84■□□□□ 0.29
IRX3P78415 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.84■□□□□ 0.29
IRX3P78415 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
IRX3P78415 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.84■□□□□ 0.29
IRX3P78415 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 IGHV3-37-201ENST00000518544 340 ntBASIC16.84■□□□□ 0.29
IRX3P78415 AP003398.1-201ENST00000531124 318 ntBASIC16.84■□□□□ 0.29
IRX3P78415 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.84■□□□□ 0.29
IRX3P78415 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.84■□□□□ 0.29
IRX3P78415 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.84■□□□□ 0.29
IRX3P78415 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms