Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.63□□□□□ -0.23
RAE1P78406 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 AC008805.1-201ENST00000590892 364 ntBASIC13.63□□□□□ -0.23
RAE1P78406 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.63□□□□□ -0.23
RAE1P78406 AP000346.4-201ENST00000614827 381 ntBASIC13.63□□□□□ -0.23
RAE1P78406 AC022748.3-201ENST00000621828 275 ntBASIC13.63□□□□□ -0.23
RAE1P78406 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAE1P78406 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RAE1P78406 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 AL365181.3-201ENST00000605886 3222 ntBASIC13.63□□□□□ -0.23
RAE1P78406 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.63□□□□□ -0.23
RAE1P78406 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 AHCYP4-201ENST00000419201 1315 ntBASIC13.63□□□□□ -0.23
RAE1P78406 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAE1P78406 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 MARK2P9-201ENST00000430958 1727 ntBASIC13.62□□□□□ -0.23
RAE1P78406 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 KRT8P29-201ENST00000420409 1371 ntBASIC13.62□□□□□ -0.23
RAE1P78406 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAE1P78406 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.62□□□□□ -0.23
RAE1P78406 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.62□□□□□ -0.23
RAE1P78406 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 Z93015.1-201ENST00000451718 390 ntBASIC13.62□□□□□ -0.23
RAE1P78406 RPL13AP20-201ENST00000459725 609 ntBASIC13.62□□□□□ -0.23
RAE1P78406 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.62□□□□□ -0.23
RAE1P78406 FAM86HP-204ENST00000513466 959 ntBASIC13.62□□□□□ -0.23
RAE1P78406 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.62□□□□□ -0.23
RAE1P78406 AC140658.4-201ENST00000561990 352 ntBASIC13.62□□□□□ -0.23
RAE1P78406 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 RN7SL560P-201ENST00000577943 264 ntBASIC13.62□□□□□ -0.23
RAE1P78406 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.62□□□□□ -0.23
RAE1P78406 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 BNIP3P13-201ENST00000599968 566 ntBASIC13.62□□□□□ -0.23
RAE1P78406 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.62□□□□□ -0.23
RAE1P78406 AC017083.2-201ENST00000608069 979 ntBASIC13.62□□□□□ -0.23
RAE1P78406 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAE1P78406 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 LINC00115-201ENST00000473798 1317 ntBASIC13.62□□□□□ -0.23
RAE1P78406 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAE1P78406 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RAE1P78406 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.62□□□□□ -0.23
RAE1P78406 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RAE1P78406 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms