Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 LILRP1-201ENST00000444199 1370 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 MIR193BHG-211ENST00000641433 5365 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 KRT8P35-201ENST00000483942 1338 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 KLF2P2-201ENST00000416807 1039 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.74□□□□□ -0.37
SEC61A1P61619 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.74□□□□□ -0.37
SEC61A1P61619 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.74□□□□□ -0.37
SEC61A1P61619 KRT18P25-201ENST00000508931 1278 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
SEC61A1P61619 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.74□□□□□ -0.37
SEC61A1P61619 SAMD11P1-201ENST00000571429 661 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 AC145423.3-201ENST00000615987 467 ntBASIC12.74□□□□□ -0.37
SEC61A1P61619 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61A1P61619 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SEC61A1P61619 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61A1P61619 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 AL158070.2-201ENST00000623713 1621 ntBASIC12.73□□□□□ -0.37
SEC61A1P61619 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 AC023794.5-201ENST00000564380 2157 ntBASIC12.73□□□□□ -0.37
SEC61A1P61619 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SEC61A1P61619 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 AC004899.2-201ENST00000622993 3860 ntBASIC12.73□□□□□ -0.37
SEC61A1P61619 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.73□□□□□ -0.37
SEC61A1P61619 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 AC099336.1-201ENST00000417053 1171 ntBASIC12.73□□□□□ -0.37
SEC61A1P61619 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 AC016694.1-201ENST00000434179 700 ntBASIC12.73□□□□□ -0.37
SEC61A1P61619 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.73□□□□□ -0.37
SEC61A1P61619 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
SEC61A1P61619 AC004066.1-201ENST00000502488 802 ntBASIC12.73□□□□□ -0.37
SEC61A1P61619 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.73□□□□□ -0.37
SEC61A1P61619 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms