Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.6□□□□□ -0.39
FOXG1P55316 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 RTN3P1-201ENST00000536295 711 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.6□□□□□ -0.39
FOXG1P55316 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.6□□□□□ -0.39
FOXG1P55316 AC140658.4-201ENST00000561990 352 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 AC093752.3-201ENST00000567343 901 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.6□□□□□ -0.39
FOXG1P55316 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.6□□□□□ -0.39
FOXG1P55316 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 AC007718.1-201ENST00000621078 280 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 AC091812.3-201ENST00000621362 345 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 CU633904.3-201ENST00000624042 1029 ntBASIC12.6□□□□□ -0.39
FOXG1P55316 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FOXG1P55316 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.6□□□□□ -0.39
FOXG1P55316 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
FOXG1P55316 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.6□□□□□ -0.39
FOXG1P55316 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.6□□□□□ -0.39
FOXG1P55316 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FOXG1P55316 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.59□□□□□ -0.39
FOXG1P55316 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.59□□□□□ -0.39
FOXG1P55316 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.59□□□□□ -0.39
FOXG1P55316 OR8T1P-201ENST00000421347 918 ntBASIC12.59□□□□□ -0.39
FOXG1P55316 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.59□□□□□ -0.39
FOXG1P55316 AL133466.1-201ENST00000447582 150 ntBASIC12.59□□□□□ -0.39
FOXG1P55316 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 DUX4L50-201ENST00000455245 715 ntBASIC12.59□□□□□ -0.39
FOXG1P55316 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 RN7SL530P-201ENST00000485097 298 ntBASIC12.59□□□□□ -0.39
FOXG1P55316 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.59□□□□□ -0.39
FOXG1P55316 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.59□□□□□ -0.39
FOXG1P55316 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.59□□□□□ -0.39
FOXG1P55316 AL133499.1-201ENST00000596207 608 ntBASIC12.59□□□□□ -0.39
FOXG1P55316 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 MIR6769A-201ENST00000617340 73 ntBASIC12.59□□□□□ -0.39
FOXG1P55316 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
FOXG1P55316 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
FOXG1P55316 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FOXG1P55316 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.59□□□□□ -0.39
FOXG1P55316 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.59□□□□□ -0.39
FOXG1P55316 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
FOXG1P55316 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FOXG1P55316 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.58□□□□□ -0.39
FOXG1P55316 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
FOXG1P55316 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FOXG1P55316 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
FOXG1P55316 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
FOXG1P55316 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.58□□□□□ -0.4
FOXG1P55316 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms