Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.55■□□□□ 0.08
HTTP42858 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 CICP6-201ENST00000457191 2729 ntBASIC15.54■□□□□ 0.08
HTTP42858 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.54■□□□□ 0.08
HTTP42858 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC15.54■□□□□ 0.08
HTTP42858 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 SOD1-202ENST00000389995 865 ntTSL 3 BASIC15.54■□□□□ 0.08
HTTP42858 RBMX2P5-201ENST00000424312 969 ntBASIC15.54■□□□□ 0.08
HTTP42858 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.54■□□□□ 0.08
HTTP42858 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.54■□□□□ 0.08
HTTP42858 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.54■□□□□ 0.08
HTTP42858 BX510359.7-201ENST00000619819 630 ntBASIC15.54■□□□□ 0.08
HTTP42858 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTTP42858 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.54■□□□□ 0.08
HTTP42858 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 AC105917.1-201ENST00000506637 2539 ntBASIC15.53■□□□□ 0.08
HTTP42858 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC15.53■□□□□ 0.08
HTTP42858 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.53■□□□□ 0.08
HTTP42858 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC15.53■□□□□ 0.08
HTTP42858 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.53■□□□□ 0.08
HTTP42858 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HTTP42858 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.53■□□□□ 0.08
HTTP42858 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 KRT19P4-201ENST00000443208 943 ntBASIC15.53■□□□□ 0.08
HTTP42858 COG6-212ENST00000630730 186 ntTSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTTP42858 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.53■□□□□ 0.08
HTTP42858 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.53■□□□□ 0.08
HTTP42858 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HTTP42858 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.52■□□□□ 0.08
HTTP42858 RN7SL76P-201ENST00000482435 289 ntBASIC15.52■□□□□ 0.08
HTTP42858 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.52■□□□□ 0.08
HTTP42858 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC15.52■□□□□ 0.08
HTTP42858 AC090616.6-202ENST00000583601 1088 ntBASIC15.52■□□□□ 0.08
HTTP42858 AC148476.1-201ENST00000622182 705 ntBASIC15.52■□□□□ 0.08
HTTP42858 DUX4L33-201ENST00000635217 958 ntBASIC15.52■□□□□ 0.08
HTTP42858 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HTTP42858 AC073869.1-201ENST00000415574 2762 ntBASIC15.52■□□□□ 0.08
HTTP42858 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.52■□□□□ 0.08
HTTP42858 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HTTP42858 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HTTP42858 MKL1-204ENST00000402630 747 ntTSL 2 BASIC15.52■□□□□ 0.08
HTTP42858 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.52■□□□□ 0.08
HTTP42858 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HTTP42858 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HTTP42858 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HTTP42858 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
HTTP42858 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.52■□□□□ 0.07
HTTP42858 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.52■□□□□ 0.07
HTTP42858 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HTTP42858 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HTTP42858 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HTTP42858 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HTTP42858 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HTTP42858 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms