Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 AL354989.2-201ENST00000435838 1540 ntBASIC15.69■□□□□ 0.1
CCDC172P0C7W6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 AL161932.2-201ENST00000435436 679 ntBASIC15.69■□□□□ 0.1
CCDC172P0C7W6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 BCRP2-202ENST00000447763 634 ntBASIC15.69■□□□□ 0.1
CCDC172P0C7W6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 BCRP6-201ENST00000510112 632 ntBASIC15.69■□□□□ 0.1
CCDC172P0C7W6 BCRP7-201ENST00000511549 544 ntBASIC15.69■□□□□ 0.1
CCDC172P0C7W6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 RN7SL713P-201ENST00000582127 302 ntBASIC15.69■□□□□ 0.1
CCDC172P0C7W6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC172P0C7W6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 COX5BP1-201ENST00000507622 393 ntBASIC15.68■□□□□ 0.1
CCDC172P0C7W6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.68■□□□□ 0.1
CCDC172P0C7W6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 AC025048.6-201ENST00000634326 1161 ntBASIC15.68■□□□□ 0.1
CCDC172P0C7W6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms