Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.02■□□□□ -0
CCDC188H7C350 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 CR392039.2-201ENST00000623182 509 ntBASIC15.02■□□□□ -0
CCDC188H7C350 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CCDC188H7C350 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
CCDC188H7C350 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCDC188H7C350 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC188H7C350 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCDC188H7C350 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC188H7C350 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC188H7C350 INE1-201ENST00000456273 945 ntBASIC15.01□□□□□ -0.01
CCDC188H7C350 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AC106820.3-201ENST00000561653 397 ntBASIC15.01□□□□□ -0.01
CCDC188H7C350 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC188H7C350 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC188H7C350 CU634019.7-201ENST00000624153 1185 ntBASIC15.01□□□□□ -0.01
CCDC188H7C350 FP236241.2-201ENST00000624906 1185 ntBASIC15.01□□□□□ -0.01
CCDC188H7C350 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC188H7C350 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC188H7C350 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC188H7C350 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 TUBB4AP1-201ENST00000450755 1325 ntBASIC15□□□□□ -0.01
CCDC188H7C350 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CCDC188H7C350 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15□□□□□ -0.01
CCDC188H7C350 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 AP001160.2-201ENST00000596071 487 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms