Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COPS3Q9UNS2 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AC064801.2-201ENST00000625052 1303 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AL138709.1-201ENST00000614840 1693 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 RN7SKP175-201ENST00000408472 289 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 RNA5SP421-201ENST00000516864 134 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AC009486.1-201ENST00000569860 813 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AC004233.3-201ENST00000607794 1269 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 AC020658.7-201ENST00000624274 2442 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COPS3Q9UNS2 LINC02486-201ENST00000604157 3000 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 DNM1P41-201ENST00000623634 3350 ntBASIC12.94□□□□□ -0.34
COPS3Q9UNS2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 MIR661-201ENST00000384842 89 ntBASIC12.93□□□□□ -0.34
COPS3Q9UNS2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.93□□□□□ -0.34
COPS3Q9UNS2 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 AP000593.2-201ENST00000542775 1433 ntBASIC12.93□□□□□ -0.34
COPS3Q9UNS2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.93□□□□□ -0.34
COPS3Q9UNS2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms