Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AP000346.2-202ENST00000425948 383 ntBASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 GAPDHP76-201ENST00000512278 976 ntBASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AC103706.1-201ENST00000561761 679 ntBASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AL357137.1-201ENST00000604645 203 ntBASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AC126365.1-201ENST00000578585 1514 ntBASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 SERF2-205ENST00000403425 690 ntTSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 CLPP-204ENST00000596149 745 ntTSL 2 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC21.66■■□□□ 1.06
RIMBP3Q9UFD9 AL662844.4-201ENST00000606367 2838 ntBASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 TUBB4AP1-201ENST00000450755 1325 ntBASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 AC092368.1-201ENST00000568014 733 ntBASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 AL117379.1-201ENST00000619319 677 ntBASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 AC244097.1-201ENST00000621631 1216 ntBASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIMBP3Q9UFD9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC21.64■■□□□ 1.06
RIMBP3Q9UFD9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.64■■□□□ 1.06
RIMBP3Q9UFD9 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC21.64■■□□□ 1.06
RIMBP3Q9UFD9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RIMBP3Q9UFD9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RIMBP3Q9UFD9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 AL356653.1-201ENST00000402743 360 ntBASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 AKR1C5P-201ENST00000427165 609 ntBASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 AC130469.2-201ENST00000625112 1092 ntBASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 CLUHP3-207ENST00000563678 1303 ntBASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIMBP3Q9UFD9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 AC073465.1-201ENST00000456671 464 ntBASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 NUP210P2-201ENST00000510577 282 ntBASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 AC091132.3-201ENST00000579701 470 ntBASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 AC138645.1-201ENST00000582765 470 ntBASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms