Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
LIN7CQ9NUP9 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
LIN7CQ9NUP9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
LIN7CQ9NUP9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
LIN7CQ9NUP9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LIN7CQ9NUP9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 MEX3B-202ENST00000558133 4333 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 PTPRVP-205ENST00000641549 5067 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 TMEM14DP-201ENST00000422205 345 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 C2orf27AP3-201ENST00000434123 579 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AC239800.4-201ENST00000603712 296 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AL354718.3-201ENST00000616414 581 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 AL162274.1-201ENST00000617191 1098 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 CR382287.1-201ENST00000623954 586 ntBASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LIN7CQ9NUP9 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 MSTO2P-201ENST00000314835 1709 ntBASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms