Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.31■□□□□ 0.04
CD248Q9HCU0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.31■□□□□ 0.04
CD248Q9HCU0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AC016700.1-201ENST00000429424 312 ntBASIC15.3■□□□□ 0.04
CD248Q9HCU0 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 HIST2H2BB-201ENST00000449108 381 ntBASIC15.3■□□□□ 0.04
CD248Q9HCU0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 MESTP3-201ENST00000503460 968 ntBASIC15.3■□□□□ 0.04
CD248Q9HCU0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AC020914.3-201ENST00000594712 304 ntBASIC15.3■□□□□ 0.04
CD248Q9HCU0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AC138466.3-201ENST00000619983 221 ntBASIC15.3■□□□□ 0.04
CD248Q9HCU0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CD248Q9HCU0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD248Q9HCU0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.29■□□□□ 0.04
CD248Q9HCU0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 CHMP4BP1-201ENST00000556017 588 ntBASIC15.29■□□□□ 0.04
CD248Q9HCU0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 AC005730.2-201ENST00000564549 1184 ntBASIC15.29■□□□□ 0.04
CD248Q9HCU0 MIR3619-201ENST00000579667 83 ntBASIC15.29■□□□□ 0.04
CD248Q9HCU0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 AP001002.3-201ENST00000623482 206 ntBASIC15.29■□□□□ 0.04
CD248Q9HCU0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD248Q9HCU0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms