Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 CICP6-201ENST00000457191 2729 ntBASIC21.06■□□□□ 0.96
SCAPERQ9BY12 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 AL139158.3-201ENST00000641212 1562 ntBASIC21.06■□□□□ 0.96
SCAPERQ9BY12 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SCAPERQ9BY12 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 AC006486.2-201ENST00000624246 2199 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 U73169.1-201ENST00000395152 367 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 KRT18P33-201ENST00000398525 1043 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 MIR1307-201ENST00000408840 149 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 PEBP1P3-201ENST00000455475 548 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 RN7SL523P-201ENST00000484401 298 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 CD44-224ENST00000526669 870 ntTSL 5 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 MBP-230ENST00000528160 584 ntTSL 5 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 AC132812.1-201ENST00000583145 892 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 AC026120.2-201ENST00000617239 309 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 AC013268.4-201ENST00000637413 2228 ntBASIC21.05■□□□□ 0.96
SCAPERQ9BY12 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 HLF-202ENST00000430986 1385 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAPERQ9BY12 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 HMGA1P1-201ENST00000415560 1062 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 AC022447.6-201ENST00000515522 438 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 AP003040.1-201ENST00000532044 1024 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 GSN-209ENST00000449733 2702 ntTSL 2 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 MIR632-201ENST00000385193 94 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 PSME2P2-201ENST00000453033 700 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 TPT1P6-201ENST00000458298 514 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 RN7SL846P-201ENST00000467429 292 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 AC108724.1-201ENST00000481669 352 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC21.04■□□□□ 0.96
SCAPERQ9BY12 AC142086.5-202ENST00000562500 217 ntBASIC21.04■□□□□ 0.96
SCAPERQ9BY12 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms