Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 AL137784.3-201ENST00000623858 2288 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 ST13P19-201ENST00000442505 1124 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 NDUFS6P1-201ENST00000485187 316 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AL031713.1-201ENST00000564813 661 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AC005632.3-201ENST00000605544 308 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 AC064801.2-201ENST00000625052 1303 ntBASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.42■□□□□ 0.38
RPAP1Q9BWH6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 MIR557-201ENST00000385239 98 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 AL627231.1-201ENST00000394467 1125 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 RPL8P2-201ENST00000430538 502 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 AC103810.10-201ENST00000606504 343 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 AC092171.5-201ENST00000608012 942 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 TCAM1P-207ENST00000485295 1537 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms