Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AC134915.1-201ENST00000426461 574 ntBASIC12.88□□□□□ -0.35
RFT1Q96AA3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 BRI3BPP1-201ENST00000594224 787 ntBASIC12.88□□□□□ -0.35
RFT1Q96AA3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AC007431.3-201ENST00000623221 587 ntBASIC12.88□□□□□ -0.35
RFT1Q96AA3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 C1QBPP1-201ENST00000400117 770 ntBASIC12.87□□□□□ -0.35
RFT1Q96AA3 AL139094.1-201ENST00000405549 1188 ntBASIC12.87□□□□□ -0.35
RFT1Q96AA3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 AC104596.2-201ENST00000512793 793 ntBASIC12.87□□□□□ -0.35
RFT1Q96AA3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 AC215219.1-201ENST00000400706 1817 ntBASIC12.87□□□□□ -0.35
RFT1Q96AA3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms