Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 AC098614.1-201ENST00000368528 745 ntBASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CD8B2-202ENST00000417670 633 ntBASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 TTTY23B-201ENST00000442790 549 ntBASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CICP12-201ENST00000455801 843 ntBASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 AC132938.2-201ENST00000579188 680 ntBASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 AC073413.1-201ENST00000603927 732 ntBASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 AL591163.1-201ENST00000641757 987 ntBASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLHC1Q8NHS4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AC004899.2-201ENST00000622993 3860 ntBASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AC005014.1-201ENST00000432006 2976 ntBASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 RN7SL692P-201ENST00000464677 288 ntBASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 COX5BP1-201ENST00000507622 393 ntBASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 KRT8P4-201ENST00000509735 1454 ntBASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms