Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 AL354877.1-201ENST00000424412 413 ntBASIC12.86□□□□□ -0.35
RTTNQ86VV8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.86□□□□□ -0.35
RTTNQ86VV8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 MIR4750-201ENST00000584564 56 ntBASIC12.86□□□□□ -0.35
RTTNQ86VV8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 AC148477.9-201ENST00000623974 539 ntBASIC12.86□□□□□ -0.35
RTTNQ86VV8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.86□□□□□ -0.35
RTTNQ86VV8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTTNQ86VV8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AL590440.2-201ENST00000641973 1595 ntBASIC12.85□□□□□ -0.35
RTTNQ86VV8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 MRPL37P1-201ENST00000592451 1337 ntBASIC12.85□□□□□ -0.35
RTTNQ86VV8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.85□□□□□ -0.35
RTTNQ86VV8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC104784.1-201ENST00000473096 294 ntBASIC12.85□□□□□ -0.35
RTTNQ86VV8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC152010.1-201ENST00000415779 2006 ntBASIC12.85□□□□□ -0.35
RTTNQ86VV8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 MST1P2-201ENST00000457982 2291 ntBASIC12.85□□□□□ -0.35
RTTNQ86VV8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.85□□□□□ -0.35
RTTNQ86VV8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTTNQ86VV8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms