Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 AC079328.1-201ENST00000560358 952 ntBASIC16.83■□□□□ 0.28
CCDC96Q2M329 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 MIR3907-201ENST00000579424 151 ntBASIC16.83■□□□□ 0.28
CCDC96Q2M329 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 AC021016.3-201ENST00000608367 477 ntBASIC16.83■□□□□ 0.28
CCDC96Q2M329 AC139749.1-202ENST00000617529 3139 ntBASIC16.83■□□□□ 0.28
CCDC96Q2M329 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC96Q2M329 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC96Q2M329 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 ELK2AP-201ENST00000392510 1007 ntBASIC16.82■□□□□ 0.28
CCDC96Q2M329 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 TPT1P11-201ENST00000458482 498 ntBASIC16.82■□□□□ 0.28
CCDC96Q2M329 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 AC242376.1-201ENST00000559033 726 ntBASIC16.82■□□□□ 0.28
CCDC96Q2M329 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 AL591471.1-201ENST00000621855 229 ntBASIC16.82■□□□□ 0.28
CCDC96Q2M329 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC96Q2M329 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC96Q2M329 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 TBC1D3J-201ENST00000620719 1426 ntBASIC16.81■□□□□ 0.28
CCDC96Q2M329 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 AC011498.7-201ENST00000624986 2027 ntBASIC16.81■□□□□ 0.28
CCDC96Q2M329 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 AL161932.2-201ENST00000435436 679 ntBASIC16.81■□□□□ 0.28
CCDC96Q2M329 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 AC234782.1-201ENST00000451950 919 ntBASIC16.81■□□□□ 0.28
CCDC96Q2M329 RN7SL277P-201ENST00000481521 288 ntBASIC16.81■□□□□ 0.28
CCDC96Q2M329 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC96Q2M329 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 MIR6769A-201ENST00000617340 73 ntBASIC16.81■□□□□ 0.28
CCDC96Q2M329 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC96Q2M329 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms