Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.25■□□□□ 0.03
TUBP50607 CU633904.3-201ENST00000624042 1029 ntBASIC15.25■□□□□ 0.03
TUBP50607 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.25■□□□□ 0.03
TUBP50607 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 AC005562.1-201ENST00000583030 3219 ntBASIC15.25■□□□□ 0.03
TUBP50607 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBP50607 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBP50607 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TUBP50607 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 AC008132.1-202ENST00000342005 1389 ntBASIC15.24■□□□□ 0.03
TUBP50607 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 AC089987.1-201ENST00000551654 2209 ntBASIC15.24■□□□□ 0.03
TUBP50607 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 AHCYP4-201ENST00000419201 1315 ntBASIC15.24■□□□□ 0.03
TUBP50607 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TUBP50607 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBP50607 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TUBP50607 ACTG1P2-201ENST00000415776 1125 ntBASIC15.24■□□□□ 0.03
TUBP50607 ACTG1P11-201ENST00000425411 1125 ntBASIC15.24■□□□□ 0.03
TUBP50607 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBP50607 XBP1P1-201ENST00000436573 652 ntBASIC15.24■□□□□ 0.03
TUBP50607 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.24■□□□□ 0.03
TUBP50607 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.24■□□□□ 0.03
TUBP50607 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBP50607 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBP50607 AL021578.1-201ENST00000613646 709 ntBASIC15.24■□□□□ 0.03
TUBP50607 AC068587.10-201ENST00000641210 219 ntBASIC15.24■□□□□ 0.03
TUBP50607 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBP50607 AL139385.1-201ENST00000611744 3272 ntBASIC15.24■□□□□ 0.03
TUBP50607 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TUBP50607 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TUBP50607 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBP50607 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBP50607 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBP50607 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.23■□□□□ 0.03
TUBP50607 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.23■□□□□ 0.03
TUBP50607 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TUBP50607 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms