Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
KRT9P35527 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 MIR497HG-202ENST00000572453 3838 ntBASIC15.86■□□□□ 0.13
KRT9P35527 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.86■□□□□ 0.13
KRT9P35527 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT9P35527 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
KRT9P35527 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT9P35527 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 AC009093.2-202ENST00000620513 2079 ntBASIC15.85■□□□□ 0.13
KRT9P35527 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 LINC02486-201ENST00000604157 3000 ntBASIC15.85■□□□□ 0.13
KRT9P35527 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 AC004945.1-201ENST00000416738 983 ntBASIC15.85■□□□□ 0.13
KRT9P35527 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.85■□□□□ 0.13
KRT9P35527 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.85■□□□□ 0.13
KRT9P35527 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 ECM1P1-201ENST00000604092 1279 ntBASIC15.85■□□□□ 0.13
KRT9P35527 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.85■□□□□ 0.13
KRT9P35527 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.85■□□□□ 0.13
KRT9P35527 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT9P35527 AL365181.3-201ENST00000605886 3222 ntBASIC15.85■□□□□ 0.13
KRT9P35527 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KRT9P35527 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT9P35527 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT9P35527 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KRT9P35527 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT9P35527 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 AC068760.1-201ENST00000493579 1953 ntBASIC15.84■□□□□ 0.13
KRT9P35527 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KRT9P35527 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
KRT9P35527 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
KRT9P35527 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT9P35527 KRT43P-201ENST00000434019 910 ntBASIC15.84■□□□□ 0.13
KRT9P35527 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT9P35527 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 FTH1P14-201ENST00000482930 551 ntBASIC15.84■□□□□ 0.13
KRT9P35527 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.84■□□□□ 0.13
KRT9P35527 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.84■□□□□ 0.13
KRT9P35527 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT9P35527 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT9P35527 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms