Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ABCD3P28288 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 AC067750.1-201ENST00000608826 6545 ntBASIC13.32□□□□□ -0.28
ABCD3P28288 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.32□□□□□ -0.28
ABCD3P28288 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ABCD3P28288 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.31□□□□□ -0.28
ABCD3P28288 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.31□□□□□ -0.28
ABCD3P28288 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.31□□□□□ -0.28
ABCD3P28288 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.31□□□□□ -0.28
ABCD3P28288 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ABCD3P28288 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 AL008707.1-201ENST00000422498 534 ntBASIC13.31□□□□□ -0.28
ABCD3P28288 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.31□□□□□ -0.28
ABCD3P28288 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 AC103810.3-201ENST00000583567 96 ntBASIC13.31□□□□□ -0.28
ABCD3P28288 NDUFV2P1-201ENST00000596415 907 ntBASIC13.31□□□□□ -0.28
ABCD3P28288 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 TUBBP5-203ENST00000508529 1334 ntBASIC13.31□□□□□ -0.28
ABCD3P28288 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ABCD3P28288 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ABCD3P28288 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
ABCD3P28288 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ABCD3P28288 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.3□□□□□ -0.28
ABCD3P28288 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.3□□□□□ -0.28
ABCD3P28288 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.3□□□□□ -0.28
ABCD3P28288 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.3□□□□□ -0.28
ABCD3P28288 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.3□□□□□ -0.28
ABCD3P28288 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.3□□□□□ -0.28
ABCD3P28288 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.3□□□□□ -0.28
ABCD3P28288 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.3□□□□□ -0.28
ABCD3P28288 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.3□□□□□ -0.28
ABCD3P28288 AC140658.4-201ENST00000561990 352 ntBASIC13.3□□□□□ -0.28
ABCD3P28288 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.3□□□□□ -0.28
ABCD3P28288 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms