Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.43□□□□□ -0.1
VCANP13611 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.43□□□□□ -0.1
VCANP13611 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 MIR648-201ENST00000385046 94 ntBASIC14.43□□□□□ -0.1
VCANP13611 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC14.43□□□□□ -0.1
VCANP13611 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.43□□□□□ -0.1
VCANP13611 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.43□□□□□ -0.1
VCANP13611 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.43□□□□□ -0.1
VCANP13611 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VCANP13611 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 AL365181.3-201ENST00000605886 3222 ntBASIC14.42□□□□□ -0.1
VCANP13611 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 KRT8P43-201ENST00000406052 1458 ntBASIC14.42□□□□□ -0.1
VCANP13611 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
VCANP13611 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.42□□□□□ -0.1
VCANP13611 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC14.42□□□□□ -0.1
VCANP13611 AL355075.5-201ENST00000553568 890 ntBASIC14.42□□□□□ -0.1
VCANP13611 RN7SL460P-201ENST00000582806 258 ntBASIC14.42□□□□□ -0.1
VCANP13611 uc_338.24-201ENST00000617802 182 ntBASIC14.42□□□□□ -0.1
VCANP13611 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC14.42□□□□□ -0.1
VCANP13611 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
VCANP13611 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 AC007950.2-201ENST00000615045 2347 ntBASIC14.42□□□□□ -0.1
VCANP13611 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 Z98885.3-201ENST00000624882 1757 ntBASIC14.42□□□□□ -0.1
VCANP13611 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.42□□□□□ -0.1
VCANP13611 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
VCANP13611 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VCANP13611 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCANP13611 SSR4P1-201ENST00000415143 412 ntBASIC14.42□□□□□ -0.1
VCANP13611 IL6RP1-201ENST00000417848 1273 ntBASIC14.42□□□□□ -0.1
VCANP13611 AC092865.2-201ENST00000439409 971 ntBASIC14.42□□□□□ -0.1
VCANP13611 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC14.42□□□□□ -0.1
VCANP13611 RPS15P5-201ENST00000449885 432 ntBASIC14.42□□□□□ -0.1
VCANP13611 RN7SL677P-201ENST00000466970 319 ntBASIC14.42□□□□□ -0.1
VCANP13611 RN7SL477P-201ENST00000488440 286 ntBASIC14.42□□□□□ -0.1
VCANP13611 AC010202.1-201ENST00000551181 405 ntBASIC14.42□□□□□ -0.1
VCANP13611 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.42□□□□□ -0.1
VCANP13611 MED11-203ENST00000575284 652 ntTSL 3 BASIC14.42□□□□□ -0.1
VCANP13611 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.42□□□□□ -0.1
VCANP13611 IMPDH1P5-201ENST00000439688 1540 ntBASIC14.42□□□□□ -0.1
VCANP13611 FKBP4P7-201ENST00000433874 1363 ntBASIC14.42□□□□□ -0.1
VCANP13611 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC14.41□□□□□ -0.1
VCANP13611 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.41□□□□□ -0.1
VCANP13611 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC14.41□□□□□ -0.1
VCANP13611 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 PLAC9P1-203ENST00000440031 223 ntBASIC14.41□□□□□ -0.1
VCANP13611 VDAC1P11-201ENST00000458323 852 ntBASIC14.41□□□□□ -0.1
VCANP13611 LDHAL6CP-201ENST00000502352 1142 ntBASIC14.41□□□□□ -0.1
VCANP13611 TBC1D3P6-201ENST00000505954 962 ntBASIC14.41□□□□□ -0.1
VCANP13611 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC14.41□□□□□ -0.1
VCANP13611 PRDX2P3-201ENST00000515779 586 ntBASIC14.41□□□□□ -0.1
VCANP13611 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.41□□□□□ -0.1
VCANP13611 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 ACTG1P23-201ENST00000437653 1074 ntBASIC14.41□□□□□ -0.1
VCANP13611 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC14.41□□□□□ -0.1
VCANP13611 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC14.41□□□□□ -0.1
VCANP13611 ELOBP2-201ENST00000526184 355 ntBASIC14.41□□□□□ -0.1
VCANP13611 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC14.41□□□□□ -0.1
VCANP13611 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC14.41□□□□□ -0.1
VCANP13611 AC090386.2-201ENST00000623010 1039 ntBASIC14.41□□□□□ -0.1
VCANP13611 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.41□□□□□ -0.1
VCANP13611 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCANP13611 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms