Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 AL157996.1-201ENST00000624684 2299 ntBASIC15.49■□□□□ 0.07
HLA-DRAP01903 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 AC011474.4-201ENST00000623523 2076 ntBASIC15.49■□□□□ 0.07
HLA-DRAP01903 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 AC091804.1-201ENST00000486888 567 ntBASIC15.49■□□□□ 0.07
HLA-DRAP01903 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRAP01903 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 MIR1247-201ENST00000408206 136 ntBASIC15.48■□□□□ 0.07
HLA-DRAP01903 AC016700.1-201ENST00000429424 312 ntBASIC15.48■□□□□ 0.07
HLA-DRAP01903 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 EIF4HP1-201ENST00000453115 687 ntBASIC15.48■□□□□ 0.07
HLA-DRAP01903 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 AC125604.1-201ENST00000496255 707 ntBASIC15.48■□□□□ 0.07
HLA-DRAP01903 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 AL645939.5-201ENST00000606834 243 ntBASIC15.48■□□□□ 0.07
HLA-DRAP01903 AC138649.2-201ENST00000615886 705 ntBASIC15.48■□□□□ 0.07
HLA-DRAP01903 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 LINC02486-201ENST00000604157 3000 ntBASIC15.48■□□□□ 0.07
HLA-DRAP01903 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DRAP01903 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRAP01903 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRAP01903 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DRAP01903 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.47■□□□□ 0.07
HLA-DRAP01903 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms