Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 COX5BP8-201ENST00000416911 349 ntBASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 AP000593.2-201ENST00000542775 1433 ntBASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 AC134312.5-201ENST00000568031 1313 ntBASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 DGCR5-201ENST00000399539 862 ntBASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 FTLP10-202ENST00000505798 471 ntBASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CHAMP1Q96JM3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHAMP1Q96JM3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 OR2I1P-209ENST00000641730 5365 ntBASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 AC104506.1-201ENST00000609247 429 ntBASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms