Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC044849.1-201ENST00000519737 1188 ntBASIC12.69□□□□□ -0.38
TMEM54Q969K7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 HMGA1P1-201ENST00000415560 1062 ntBASIC12.68□□□□□ -0.38
TMEM54Q969K7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 AC004898.1-201ENST00000451057 766 ntBASIC12.68□□□□□ -0.38
TMEM54Q969K7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 AL118558.3-201ENST00000607414 1079 ntBASIC12.68□□□□□ -0.38
TMEM54Q969K7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM54Q969K7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 SHMT1P1-201ENST00000419974 1312 ntBASIC12.67□□□□□ -0.38
TMEM54Q969K7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TMEM54Q969K7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TMEM54Q969K7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms