Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ERCC4Q92889 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
ERCC4Q92889 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 AC015909.5-201ENST00000624336 2266 ntBASIC16.46■□□□□ 0.23
ERCC4Q92889 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC4Q92889 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC4Q92889 TDH-203ENST00000531764 1110 ntBASIC16.46■□□□□ 0.23
ERCC4Q92889 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC4Q92889 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC4Q92889 BX088702.1-201ENST00000610784 235 ntBASIC16.46■□□□□ 0.23
ERCC4Q92889 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 AL445209.1-201ENST00000607269 3491 ntBASIC16.46■□□□□ 0.23
ERCC4Q92889 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ERCC4Q92889 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC4Q92889 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC4Q92889 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC4Q92889 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
ERCC4Q92889 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
ERCC4Q92889 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC4Q92889 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC4Q92889 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ERCC4Q92889 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC4Q92889 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC4Q92889 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 AC027612.1-201ENST00000445234 2395 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 TSN-212ENST00000536142 3328 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC4Q92889 RN7SKP175-201ENST00000408472 289 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 FAM207CP-201ENST00000443486 507 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 FTLP10-202ENST00000505798 471 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC4Q92889 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.45■□□□□ 0.22
ERCC4Q92889 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC4Q92889 AC009486.1-201ENST00000569860 813 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 MIR4683-201ENST00000579659 81 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 GNRHR2-203ENST00000581100 1187 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 AC010319.3-201ENST00000597028 470 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC4Q92889 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ERCC4Q92889 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 AL928654.5-201ENST00000624831 2501 ntBASIC16.45■□□□□ 0.22
ERCC4Q92889 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC4Q92889 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ERCC4Q92889 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC4Q92889 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms