Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 GUSBP10-201ENST00000417412 665 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 AL354861.1-201ENST00000445213 355 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 AP003398.1-201ENST00000531124 318 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 HERC2P11-201ENST00000562845 725 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 AC100756.2-201ENST00000569537 736 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 RN7SL470P-201ENST00000583069 259 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 MIR4750-201ENST00000584564 56 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 MIR2392-201ENST00000584881 84 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 AC025262.2-201ENST00000623975 1056 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 PAX6-247ENST00000638965 979 ntTSL 5 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 AC006372.4-201ENST00000624122 1543 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLF2Q8IX21 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 AC090505.1-201ENST00000430515 1834 ntBASIC17.14■□□□□ 0.33
SLF2Q8IX21 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.14■□□□□ 0.33
SLF2Q8IX21 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 RPL13AP3-202ENST00000494676 1473 ntBASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC092053.3-201ENST00000641308 4975 ntBASIC17.13■□□□□ 0.33
SLF2Q8IX21 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 HIST2H2BA-201ENST00000412169 381 ntBASIC17.13■□□□□ 0.33
SLF2Q8IX21 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 CHCHD2P2-201ENST00000503744 321 ntBASIC17.13■□□□□ 0.33
SLF2Q8IX21 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.13■□□□□ 0.33
SLF2Q8IX21 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AL591122.2-201ENST00000624125 1853 ntBASIC17.13■□□□□ 0.33
SLF2Q8IX21 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 AC011498.7-201ENST00000624986 2027 ntBASIC17.13■□□□□ 0.33
SLF2Q8IX21 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLF2Q8IX21 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.13■□□□□ 0.33
SLF2Q8IX21 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
SLF2Q8IX21 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLF2Q8IX21 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLF2Q8IX21 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLF2Q8IX21 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLF2Q8IX21 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLF2Q8IX21 AC103592.1-201ENST00000394513 664 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms