Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 AC026954.1-201ENST00000429771 1293 ntBASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CTBP2P5-201ENST00000454986 1264 ntBASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 AC021016.3-201ENST00000608367 477 ntBASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 AC111170.3-201ENST00000624282 2464 ntBASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC104581.4-201ENST00000623126 3052 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC089987.1-201ENST00000551654 2209 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC130686.1-201ENST00000622936 2466 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC079178.1-201ENST00000420915 656 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC100850.1-201ENST00000506768 649 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC009955.4-201ENST00000597192 544 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 BAP1-211ENST00000615113 489 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 LAP3P2-201ENST00000454686 1454 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 AC244394.1-201ENST00000435000 1665 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 REXO1L6P-201ENST00000603433 1515 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms