Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 CROCCP4-201ENST00000457096 498 ntBASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AL136301.1-201ENST00000615830 422 ntBASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 TUBB8P4-201ENST00000511806 1324 ntBASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC064801.2-201ENST00000625052 1303 ntBASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AC006001.1-201ENST00000325130 474 ntBASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AC005586.2-201ENST00000563946 837 ntBASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 MIR3197-201ENST00000582241 73 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms