Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL3Q6DD88 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATL3Q6DD88 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.48■□□□□ 0.23
ATL3Q6DD88 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 CCT8L1P-201ENST00000465400 1674 ntBASIC16.47■□□□□ 0.23
ATL3Q6DD88 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AC022217.1-201ENST00000521069 738 ntBASIC16.47■□□□□ 0.23
ATL3Q6DD88 AP000812.2-201ENST00000538934 718 ntBASIC16.47■□□□□ 0.23
ATL3Q6DD88 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AC124068.2-201ENST00000569473 1109 ntBASIC16.47■□□□□ 0.23
ATL3Q6DD88 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AC009955.4-201ENST00000597192 544 ntBASIC16.47■□□□□ 0.23
ATL3Q6DD88 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AL591471.1-201ENST00000621855 229 ntBASIC16.47■□□□□ 0.23
ATL3Q6DD88 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 RHOXF1P1-202ENST00000635473 501 ntBASIC16.47■□□□□ 0.23
ATL3Q6DD88 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATL3Q6DD88 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.47■□□□□ 0.23
ATL3Q6DD88 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 E2F3P2-201ENST00000447755 1422 ntBASIC16.46■□□□□ 0.23
ATL3Q6DD88 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 HIST2H2BB-201ENST00000449108 381 ntBASIC16.46■□□□□ 0.23
ATL3Q6DD88 HOMER2P2-201ENST00000451621 847 ntBASIC16.46■□□□□ 0.23
ATL3Q6DD88 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 AC061965.1-201ENST00000560524 1465 ntBASIC16.46■□□□□ 0.23
ATL3Q6DD88 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATL3Q6DD88 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATL3Q6DD88 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms