Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 KRT8P4-201ENST00000509735 1454 ntBASIC14.28□□□□□ -0.12
CDKL1Q00532 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.28□□□□□ -0.12
CDKL1Q00532 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC023310.1-201ENST00000554836 735 ntBASIC14.28□□□□□ -0.12
CDKL1Q00532 AC005586.2-201ENST00000563946 837 ntBASIC14.28□□□□□ -0.12
CDKL1Q00532 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.28□□□□□ -0.12
CDKL1Q00532 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC012617.1-204ENST00000586340 2305 ntBASIC14.28□□□□□ -0.12
CDKL1Q00532 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.28□□□□□ -0.12
CDKL1Q00532 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC008687.7-202ENST00000637404 953 ntBASIC14.28□□□□□ -0.12
CDKL1Q00532 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.28□□□□□ -0.12
CDKL1Q00532 AC004241.5-201ENST00000623870 2448 ntBASIC14.27□□□□□ -0.12
CDKL1Q00532 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CDKL1Q00532 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
CDKL1Q00532 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.27□□□□□ -0.12
CDKL1Q00532 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CDKL1Q00532 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.27□□□□□ -0.12
CDKL1Q00532 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
CDKL1Q00532 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.27□□□□□ -0.12
CDKL1Q00532 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.27□□□□□ -0.12
CDKL1Q00532 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CDKL1Q00532 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 AL139385.1-201ENST00000611744 3272 ntBASIC14.27□□□□□ -0.12
CDKL1Q00532 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CDKL1Q00532 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.27□□□□□ -0.12
CDKL1Q00532 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKL1Q00532 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.27□□□□□ -0.12
CDKL1Q00532 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKL1Q00532 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CDKL1Q00532 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CDKL1Q00532 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKL1Q00532 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKL1Q00532 HOMER2P2-201ENST00000451621 847 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 KLF2P4-201ENST00000451959 1225 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKL1Q00532 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 CROCCP4-201ENST00000457096 498 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKL1Q00532 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKL1Q00532 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.27□□□□□ -0.13
CDKL1Q00532 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKL1Q00532 AC104506.1-201ENST00000609247 429 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 AL136301.1-201ENST00000615830 422 ntBASIC14.27□□□□□ -0.13
CDKL1Q00532 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDKL1Q00532 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKL1Q00532 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms