Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.21□□□□□ -0.29
CXCR4P61073 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.21□□□□□ -0.29
CXCR4P61073 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CXCR4P61073 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 RNU1-114P-201ENST00000365297 166 ntBASIC13.21□□□□□ -0.29
CXCR4P61073 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CXCR4P61073 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 MIR1233-2-201ENST00000408138 82 ntBASIC13.21□□□□□ -0.29
CXCR4P61073 MIR1233-1-201ENST00000408722 82 ntBASIC13.21□□□□□ -0.29
CXCR4P61073 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.21□□□□□ -0.29
CXCR4P61073 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.21□□□□□ -0.29
CXCR4P61073 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.21□□□□□ -0.29
CXCR4P61073 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.21□□□□□ -0.29
CXCR4P61073 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.21□□□□□ -0.29
CXCR4P61073 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 AL390955.2-201ENST00000603032 514 ntBASIC13.21□□□□□ -0.29
CXCR4P61073 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CXCR4P61073 AL691403.2-201ENST00000618460 490 ntBASIC13.21□□□□□ -0.29
CXCR4P61073 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 INTS4P2-202ENST00000614726 2019 ntBASIC13.21□□□□□ -0.29
CXCR4P61073 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CXCR4P61073 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.21□□□□□ -0.29
CXCR4P61073 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.21□□□□□ -0.29
CXCR4P61073 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CXCR4P61073 AGGF1P10-201ENST00000635005 2191 ntBASIC13.21□□□□□ -0.3
CXCR4P61073 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CXCR4P61073 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CXCR4P61073 GHET1-201ENST00000627071 1906 ntBASIC13.21□□□□□ -0.3
CXCR4P61073 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CXCR4P61073 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CXCR4P61073 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.21□□□□□ -0.3
CXCR4P61073 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.21□□□□□ -0.3
CXCR4P61073 AC115284.2-201ENST00000624646 2054 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 AL161932.2-201ENST00000435436 679 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 AC004890.2-204ENST00000481968 304 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 DOC2GP-202ENST00000514950 1163 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.2□□□□□ -0.3
CXCR4P61073 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 SPDYE22P-201ENST00000582158 798 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 BRI3BPP1-201ENST00000594224 787 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.2□□□□□ -0.3
CXCR4P61073 BX088702.1-201ENST00000610784 235 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 AC004790.1-201ENST00000612686 536 ntBASIC13.2□□□□□ -0.3
CXCR4P61073 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CXCR4P61073 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms