Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
LIMK1P53667 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LIMK1P53667 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 ACTG1P19-201ENST00000418987 1116 ntBASIC14.21□□□□□ -0.13
LIMK1P53667 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 GNG10P1-201ENST00000452289 199 ntBASIC14.21□□□□□ -0.13
LIMK1P53667 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 AC026470.1-201ENST00000478038 846 ntBASIC14.21□□□□□ -0.13
LIMK1P53667 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LIMK1P53667 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.21□□□□□ -0.13
LIMK1P53667 AC226150.1-201ENST00000544259 466 ntBASIC14.21□□□□□ -0.13
LIMK1P53667 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.21□□□□□ -0.13
LIMK1P53667 AC068867.1-201ENST00000559855 150 ntBASIC14.21□□□□□ -0.13
LIMK1P53667 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 AC006483.2-201ENST00000609813 515 ntBASIC14.21□□□□□ -0.13
LIMK1P53667 MIR6816-201ENST00000620368 66 ntBASIC14.21□□□□□ -0.13
LIMK1P53667 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.21□□□□□ -0.13
LIMK1P53667 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.21□□□□□ -0.13
LIMK1P53667 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMK1P53667 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LIMK1P53667 BX640514.1-201ENST00000583223 1918 ntBASIC14.21□□□□□ -0.14
LIMK1P53667 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LIMK1P53667 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LIMK1P53667 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.21□□□□□ -0.14
LIMK1P53667 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LIMK1P53667 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIMK1P53667 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LIMK1P53667 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 ENPP7P8-202ENST00000527856 1345 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 AC023024.2-201ENST00000623561 1993 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 KRT17P5-201ENST00000332088 839 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 MIR566-201ENST00000385187 94 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.2□□□□□ -0.14
LIMK1P53667 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 AC023906.1-201ENST00000486386 453 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 OR5BD1P-201ENST00000532527 817 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.2□□□□□ -0.14
LIMK1P53667 AC003686.1-201ENST00000550956 1034 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms