Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC015813.5-201ENST00000624641 1514 ntBASIC15.6■□□□□ 0.09
HTTP42858 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 AC097474.1-201ENST00000506481 1371 ntBASIC15.59■□□□□ 0.09
HTTP42858 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 RN7SL794P-201ENST00000469816 280 ntBASIC15.59■□□□□ 0.09
HTTP42858 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 MEP1AP1-201ENST00000636082 1097 ntBASIC15.59■□□□□ 0.09
HTTP42858 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC15.59■□□□□ 0.09
HTTP42858 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 AC068760.1-201ENST00000493579 1953 ntBASIC15.59■□□□□ 0.09
HTTP42858 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HTTP42858 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 AL354702.1-201ENST00000442006 1960 ntBASIC15.59■□□□□ 0.09
HTTP42858 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC15.59■□□□□ 0.09
HTTP42858 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.59■□□□□ 0.09
HTTP42858 SRP9P1-201ENST00000445874 261 ntBASIC15.59■□□□□ 0.09
HTTP42858 AC112250.1-201ENST00000504640 745 ntBASIC15.59■□□□□ 0.09
HTTP42858 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC15.59■□□□□ 0.09
HTTP42858 HNRNPA1P72-201ENST00000529511 967 ntBASIC15.59■□□□□ 0.09
HTTP42858 NEMF-210ENST00000556672 590 ntTSL 2 BASIC15.59■□□□□ 0.09
HTTP42858 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HTTP42858 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.59■□□□□ 0.09
HTTP42858 AF186996.6-201ENST00000485294 149 ntBASIC15.59■□□□□ 0.09
HTTP42858 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.59■□□□□ 0.09
HTTP42858 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HTTP42858 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
HTTP42858 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HTTP42858 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.58■□□□□ 0.09
HTTP42858 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.58■□□□□ 0.09
HTTP42858 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
HTTP42858 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
HTTP42858 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.58■□□□□ 0.09
HTTP42858 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.58■□□□□ 0.09
HTTP42858 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HTTP42858 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.09
HTTP42858 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.58■□□□□ 0.08
HTTP42858 PPP1R2P10-201ENST00000393023 595 ntBASIC15.58■□□□□ 0.08
HTTP42858 TUBB2BP1-201ENST00000404155 871 ntBASIC15.58■□□□□ 0.08
HTTP42858 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 AL136298.3-201ENST00000556746 445 ntBASIC15.58■□□□□ 0.08
HTTP42858 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC15.58■□□□□ 0.08
HTTP42858 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.58■□□□□ 0.08
HTTP42858 RN7SL832P-201ENST00000607781 1756 ntBASIC15.58■□□□□ 0.08
HTTP42858 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.58■□□□□ 0.08
HTTP42858 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.58■□□□□ 0.08
HTTP42858 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HTTP42858 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.58■□□□□ 0.08
HTTP42858 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
HTTP42858 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HTTP42858 MIR193A-201ENST00000384882 88 ntBASIC15.58■□□□□ 0.08
HTTP42858 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC15.58■□□□□ 0.08
HTTP42858 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC15.58■□□□□ 0.08
HTTP42858 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC15.58■□□□□ 0.08
HTTP42858 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC15.58■□□□□ 0.08
HTTP42858 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.58■□□□□ 0.08
HTTP42858 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HTTP42858 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.57■□□□□ 0.08
HTTP42858 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HTTP42858 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.57■□□□□ 0.08
HTTP42858 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms