Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRIM23P36406 INTS4P1-203ENST00000641008 3683 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 LINC01815-202ENST00000641468 1409 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM23P36406 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 AC091046.1-201ENST00000331871 207 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 KRT17P5-201ENST00000332088 839 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM23P36406 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 AC092506.1-202ENST00000401022 528 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM23P36406 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM23P36406 AP000358.1-201ENST00000456260 156 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM23P36406 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 IGLV3-15-201ENST00000518356 244 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
TRIM23P36406 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRIM23P36406 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.18□□□□□ -0.14
TRIM23P36406 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM23P36406 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRIM23P36406 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRIM23P36406 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 CAP2P1-201ENST00000557743 1390 ntBASIC14.18□□□□□ -0.14
TRIM23P36406 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM23P36406 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM23P36406 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM23P36406 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
TRIM23P36406 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM23P36406 AC097359.2-201ENST00000604992 2389 ntBASIC14.17□□□□□ -0.14
TRIM23P36406 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM23P36406 FTLP1-201ENST00000449155 526 ntBASIC14.17□□□□□ -0.14
TRIM23P36406 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM23P36406 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM23P36406 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRIM23P36406 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM23P36406 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.17□□□□□ -0.14
TRIM23P36406 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.17□□□□□ -0.14
TRIM23P36406 AC007718.1-201ENST00000621078 280 ntBASIC14.17□□□□□ -0.14
TRIM23P36406 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM23P36406 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
TRIM23P36406 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms