Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.44□□□□□ -0.42
CD40P25942 FTLP1-201ENST00000449155 526 ntBASIC12.44□□□□□ -0.42
CD40P25942 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.44□□□□□ -0.42
CD40P25942 AC019193.1-201ENST00000506678 823 ntBASIC12.44□□□□□ -0.42
CD40P25942 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
CD40P25942 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.44□□□□□ -0.42
CD40P25942 AC093752.3-201ENST00000567343 901 ntBASIC12.44□□□□□ -0.42
CD40P25942 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.44□□□□□ -0.42
CD40P25942 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.44□□□□□ -0.42
CD40P25942 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 CAP2P1-201ENST00000557743 1390 ntBASIC12.43□□□□□ -0.42
CD40P25942 AC007686.3-201ENST00000619017 3487 ntBASIC12.43□□□□□ -0.42
CD40P25942 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CD40P25942 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CD40P25942 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 AL583805.1-201ENST00000391389 531 ntBASIC12.43□□□□□ -0.42
CD40P25942 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.43□□□□□ -0.42
CD40P25942 HINT2P1-201ENST00000419438 481 ntBASIC12.43□□□□□ -0.42
CD40P25942 AL592076.1-201ENST00000424448 303 ntBASIC12.43□□□□□ -0.42
CD40P25942 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.43□□□□□ -0.42
CD40P25942 AP000358.1-201ENST00000456260 156 ntBASIC12.43□□□□□ -0.42
CD40P25942 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.43□□□□□ -0.42
CD40P25942 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CD40P25942 MIR3677-201ENST00000578964 60 ntBASIC12.43□□□□□ -0.42
CD40P25942 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.43□□□□□ -0.42
CD40P25942 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 AC007718.1-201ENST00000621078 280 ntBASIC12.43□□□□□ -0.42
CD40P25942 AC128714.1-201ENST00000637035 887 ntBASIC12.43□□□□□ -0.42
CD40P25942 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms