Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 HLA-K-203ENST00000430151 1046 ntBASIC16.56■□□□□ 0.24
TPM2P07951 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM2P07951 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM2P07951 AL512638.1-201ENST00000457493 794 ntBASIC16.56■□□□□ 0.24
TPM2P07951 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
TPM2P07951 AL390754.1-201ENST00000619088 582 ntBASIC16.56■□□□□ 0.24
TPM2P07951 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM2P07951 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPM2P07951 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM2P07951 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TPM2P07951 AL031719.1-201ENST00000623365 2587 ntBASIC16.56■□□□□ 0.24
TPM2P07951 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM2P07951 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPM2P07951 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM2P07951 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM2P07951 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPM2P07951 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM2P07951 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM2P07951 SUPT20HL1-201ENST00000436466 2618 ntBASIC16.55■□□□□ 0.24
TPM2P07951 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TPM2P07951 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TPM2P07951 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM2P07951 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM2P07951 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM2P07951 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM2P07951 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.55■□□□□ 0.24
TPM2P07951 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM2P07951 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM2P07951 AL391069.4-201ENST00000609583 481 ntBASIC16.55■□□□□ 0.24
TPM2P07951 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 BX539320.1-201ENST00000623759 877 ntBASIC16.55■□□□□ 0.24
TPM2P07951 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TPM2P07951 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TPM2P07951 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 AC022144.1-201ENST00000602255 1580 ntBASIC16.55■□□□□ 0.24
TPM2P07951 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TPM2P07951 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM2P07951 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM2P07951 AC024075.2-201ENST00000598112 1473 ntBASIC16.54■□□□□ 0.24
TPM2P07951 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TPM2P07951 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM2P07951 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM2P07951 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM2P07951 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TPM2P07951 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TPM2P07951 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM2P07951 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.54■□□□□ 0.24
TPM2P07951 MEP1AP4-201ENST00000423244 1087 ntBASIC16.54■□□□□ 0.24
TPM2P07951 TSSK5P-201ENST00000423978 907 ntBASIC16.54■□□□□ 0.24
TPM2P07951 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms