Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.58□□□□□ -0.08
RETP07949 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.58□□□□□ -0.08
RETP07949 AC027237.1-201ENST00000560942 655 ntBASIC14.58□□□□□ -0.08
RETP07949 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.58□□□□□ -0.08
RETP07949 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.58□□□□□ -0.08
RETP07949 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.58□□□□□ -0.08
RETP07949 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.58□□□□□ -0.08
RETP07949 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.58□□□□□ -0.08
RETP07949 AC104581.4-201ENST00000623126 3052 ntBASIC14.58□□□□□ -0.08
RETP07949 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RETP07949 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.58□□□□□ -0.08
RETP07949 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RETP07949 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RETP07949 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.58□□□□□ -0.08
RETP07949 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RETP07949 LINC01815-202ENST00000641468 1409 ntBASIC14.58□□□□□ -0.08
RETP07949 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
RETP07949 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RETP07949 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.57□□□□□ -0.08
RETP07949 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.57□□□□□ -0.08
RETP07949 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 AL157414.3-201ENST00000624276 1954 ntBASIC14.57□□□□□ -0.08
RETP07949 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 HLA-DMA-203ENST00000395305 777 ntBASIC14.57□□□□□ -0.08
RETP07949 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.57□□□□□ -0.08
RETP07949 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RETP07949 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.57□□□□□ -0.08
RETP07949 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.57□□□□□ -0.08
RETP07949 ALG3P1-201ENST00000508806 1114 ntBASIC14.57□□□□□ -0.08
RETP07949 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.57□□□□□ -0.08
RETP07949 CR383656.3-201ENST00000551315 183 ntBASIC14.57□□□□□ -0.08
RETP07949 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.57□□□□□ -0.08
RETP07949 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 AP000845.1-201ENST00000581677 2131 ntBASIC14.57□□□□□ -0.08
RETP07949 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.57□□□□□ -0.08
RETP07949 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RETP07949 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.57□□□□□ -0.08
RETP07949 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RETP07949 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RETP07949 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RETP07949 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.56□□□□□ -0.08
RETP07949 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.56□□□□□ -0.08
RETP07949 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.56□□□□□ -0.08
RETP07949 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.56□□□□□ -0.08
RETP07949 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RETP07949 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RETP07949 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.56□□□□□ -0.08
RETP07949 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.56□□□□□ -0.08
RETP07949 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 AC026410.1-201ENST00000507366 1101 ntBASIC14.56□□□□□ -0.08
RETP07949 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.56□□□□□ -0.08
RETP07949 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.56□□□□□ -0.08
RETP07949 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.56□□□□□ -0.08
RETP07949 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RETP07949 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC14.56□□□□□ -0.08
RETP07949 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
RETP07949 AC002472.4-201ENST00000641915 272 ntBASIC14.56□□□□□ -0.08
RETP07949 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.56□□□□□ -0.08
RETP07949 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RETP07949 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms