Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 RN7SL677P-201ENST00000466970 319 ntBASIC6.21□□□□□ -1.42
USH2AO75445 RN7SL479P-201ENST00000472003 300 ntBASIC6.21□□□□□ -1.42
USH2AO75445 AC020893.2-201ENST00000506083 723 ntBASIC6.21□□□□□ -1.42
USH2AO75445 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 PCDHA1-201ENST00000378133 2726 ntBASIC6.21□□□□□ -1.42
USH2AO75445 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC6.21□□□□□ -1.42
USH2AO75445 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC6.21□□□□□ -1.42
USH2AO75445 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 AL031577.1-201ENST00000339867 399 ntBASIC6.21□□□□□ -1.42
USH2AO75445 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 HNRNPA1P68-201ENST00000425806 979 ntBASIC6.21□□□□□ -1.42
USH2AO75445 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC6.21□□□□□ -1.42
USH2AO75445 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 ELOBP2-201ENST00000526184 355 ntBASIC6.21□□□□□ -1.42
USH2AO75445 MAX-218ENST00000557746 571 ntTSL 4 BASIC6.21□□□□□ -1.42
USH2AO75445 AC091691.1-201ENST00000583587 1018 ntBASIC6.21□□□□□ -1.42
USH2AO75445 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC6.21□□□□□ -1.42
USH2AO75445 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USH2AO75445 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC6.21□□□□□ -1.42
USH2AO75445 AC069421.1-201ENST00000447462 323 ntBASIC6.21□□□□□ -1.42
USH2AO75445 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC6.21□□□□□ -1.42
USH2AO75445 AC012100.1-201ENST00000470304 282 ntBASIC6.21□□□□□ -1.42
USH2AO75445 JPT1-205ENST00000470924 663 ntTSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 RN7SL638P-201ENST00000494527 290 ntBASIC6.21□□□□□ -1.42
USH2AO75445 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 MIR378I-201ENST00000582688 76 ntBASIC6.21□□□□□ -1.42
USH2AO75445 AL356740.1-201ENST00000602192 1297 ntBASIC6.21□□□□□ -1.42
USH2AO75445 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 GSN-206ENST00000394353 2311 ntTSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC6.2□□□□□ -1.42
USH2AO75445 MX1-218ENST00000619682 1980 ntTSL 5 BASIC6.2□□□□□ -1.42
USH2AO75445 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 AC006987.1-201ENST00000413610 527 ntBASIC6.2□□□□□ -1.42
USH2AO75445 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC6.2□□□□□ -1.42
USH2AO75445 BICD1P1-201ENST00000457832 1222 ntBASIC6.2□□□□□ -1.42
USH2AO75445 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
USH2AO75445 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
USH2AO75445 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 DRG2-220ENST00000583355 891 ntTSL 3 BASIC6.2□□□□□ -1.42
USH2AO75445 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC6.2□□□□□ -1.42
USH2AO75445 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC6.2□□□□□ -1.42
USH2AO75445 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 BLK-205ENST00000529894 2017 ntTSL 5 BASIC6.2□□□□□ -1.42
USH2AO75445 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC6.2□□□□□ -1.42
USH2AO75445 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USH2AO75445 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USH2AO75445 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms