Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 SSR1P1-201ENST00000407630 814 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 TREML5P-201ENST00000421694 576 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AC107890.1-201ENST00000422478 521 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 CNN2P11-201ENST00000429351 262 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 MYCLP2-201ENST00000449268 967 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AC104794.3-201ENST00000566840 1248 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AL158211.3-201ENST00000607385 239 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AL645937.6-201ENST00000641122 3727 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 MSNP1-201ENST00000511640 1732 ntBASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 HCG24-202ENST00000414398 717 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AL391280.1-201ENST00000506969 1062 ntBASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AGGF1P10-201ENST00000635005 2191 ntBASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms