Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX6Q9UPM6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX6Q9UPM6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LHX6Q9UPM6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AC099063.4-201ENST00000641099 1602 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AL357563.1-201ENST00000404728 395 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AL590240.2-201ENST00000413370 894 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 MTND4P32-201ENST00000437189 1237 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 MTND4P6-201ENST00000438297 472 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 SCAND3P1-201ENST00000439854 1060 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AL122001.1-201ENST00000457027 370 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AC137549.1-201ENST00000514243 533 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 TMCO5B-205ENST00000530020 894 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AC087683.2-201ENST00000611384 326 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 HMGB1P24-201ENST00000611897 328 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AL365203.3-201ENST00000609742 2057 ntBASIC13.98□□□□□ -0.17
LHX6Q9UPM6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX6Q9UPM6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 NHP2P1-201ENST00000335274 462 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AL583805.1-201ENST00000391389 531 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AP000358.1-201ENST00000456260 156 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC090680.1-201ENST00000464696 860 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AP001636.2-201ENST00000525517 696 ntBASIC13.97□□□□□ -0.17
LHX6Q9UPM6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC13.97□□□□□ -0.17
LHX6Q9UPM6 AC007066.2-202ENST00000566531 914 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms