Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 RCC2P8-201ENST00000502779 1035 ntBASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AL160314.3-201ENST00000556041 767 ntBASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 SNORD3B-2-202ENST00000571722 791 ntBASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AC005962.1-201ENST00000584100 773 ntBASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA1Q9UND3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
NPIPA1Q9UND3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.4□□□□□ -0.27
NPIPA1Q9UND3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 MBLAC2-202ENST00000514906 1936 ntBASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 BX640514.1-201ENST00000583223 1918 ntBASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AC007274.2-201ENST00000421675 662 ntBASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 TPT1P11-201ENST00000458482 498 ntBASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms