Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL645937.6-201ENST00000641122 3727 ntBASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 C2-206ENST00000442278 2434 ntTSL 2 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHAMP1Q96JM3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 AL445250.1-201ENST00000641671 2259 ntBASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 AC106820.3-201ENST00000561653 397 ntBASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 BAP1-211ENST00000615113 489 ntBASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 AP002761.4-201ENST00000565433 3361 ntBASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHAMP1Q96JM3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 GNRHR2-203ENST00000581100 1187 ntBASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHAMP1Q96JM3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 MEX3B-202ENST00000558133 4333 ntBASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHAMP1Q96JM3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms