Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 AC068620.2-201ENST00000602927 529 ntBASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 OR52I2-202ENST00000641486 1115 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 GOLGA8UP-201ENST00000527159 1755 ntBASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 PCDH8P1-201ENST00000428983 2773 ntBASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNE2Q8WXH0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 YBX1P9-201ENST00000441264 679 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ARL15-205ENST00000507646 578 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AP002490.2-201ENST00000524791 560 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AP001189.3-201ENST00000531511 651 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 MIR5091-201ENST00000578707 93 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC148477.7-201ENST00000623871 428 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC006974.2-201ENST00000637240 1227 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AL138847.2-201ENST00000624477 1819 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 KRT8P28-201ENST00000433288 1390 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 GAGE12H-201ENST00000381722 527 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ANKRD61-201ENST00000409061 1257 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 PFN1P3-201ENST00000443612 402 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 PFN1P4-201ENST00000450970 402 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 CXXC1P1-202ENST00000489409 1212 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC097467.2-201ENST00000502884 346 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 LINC02256-202ENST00000564670 543 ntTSL 4 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ARL16-207ENST00000573392 869 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AP003028.1-201ENST00000577699 1033 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC011676.5-201ENST00000624864 2660 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC007279.1-201ENST00000448547 837 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 FGF11-205ENST00000575398 990 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AL513485.1-201ENST00000617915 845 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ECSCR-201ENST00000618155 1035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC012313.9-201ENST00000619318 633 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 MIR6732-201ENST00000619365 60 ntBASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 DDX41-218ENST00000625286 150 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 AC091078.1-204ENST00000556519 1321 ntTSL 4 BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE2Q8WXH0 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms